problem reading 3F9K.pdb; babel has same problem

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problem reading 3F9K.pdb; babel has same problem

TJ O'Donnell
I'm having trouble reading 3F9K.pdb, freshly downloaded from pdb.org
My own code was crashing with no notice from within OBConversion.Read()
So, I tried babel 3F9K.pdb -opdb and I got the same problem -
babel just returns the command prompt after a minute or so.
This does NOT happen on linux, but does on Windows.
Can someone help me figure out what's going on?
I'm using openbabel2.2.3

Thanks,
TJ O'Donnell

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Re: problem reading 3F9K.pdb; babel has same problem

Noel O'Boyle
Administrator
It was a bug in 2.2.3 which has since been fixed (there was a bug
filed). I tested your PDB file on Windows with the current development
code, and it worked fine.

- Noel

On 6 March 2010 19:51, TJ O'Donnell <[hidden email]> wrote:

> I'm having trouble reading 3F9K.pdb, freshly downloaded from pdb.org
> My own code was crashing with no notice from within OBConversion.Read()
> So, I tried babel 3F9K.pdb -opdb and I got the same problem -
> babel just returns the command prompt after a minute or so.
> This does NOT happen on linux, but does on Windows.
> Can someone help me figure out what's going on?
> I'm using openbabel2.2.3
>
> Thanks,
> TJ O'Donnell
>
> ------------------------------------------------------------------------------
> Download Intel&#174; Parallel Studio Eval
> Try the new software tools for yourself. Speed compiling, find bugs
> proactively, and fine-tune applications for parallel performance.
> See why Intel Parallel Studio got high marks during beta.
> http://p.sf.net/sfu/intel-sw-dev
> _______________________________________________
> OpenBabel-discuss mailing list
> [hidden email]
> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
>

------------------------------------------------------------------------------
Download Intel&#174; Parallel Studio Eval
Try the new software tools for yourself. Speed compiling, find bugs
proactively, and fine-tune applications for parallel performance.
See why Intel Parallel Studio got high marks during beta.
http://p.sf.net/sfu/intel-sw-dev
_______________________________________________
OpenBabel-discuss mailing list
[hidden email]
https://lists.sourceforge.net/lists/listinfo/openbabel-discuss